Struct gapi_grpc::google::genomics::v1::VariantSet

pub struct VariantSet {
    pub dataset_id: String,
    pub id: String,
    pub reference_set_id: String,
    pub reference_bounds: Vec<ReferenceBound>,
    pub metadata: Vec<VariantSetMetadata>,
    pub name: String,
    pub description: String,
}

A variant set is a collection of call sets and variants. It contains summary statistics of those contents. A variant set belongs to a dataset.

For more genomics resource definitions, see Fundamentals of Google Genomics

Fields

dataset_id: String

The dataset to which this variant set belongs.

id: String

The server-generated variant set ID, unique across all variant sets.

reference_set_id: String

The reference set to which the variant set is mapped. The reference set describes the alignment provenance of the variant set, while the referenceBounds describe the shape of the actual variant data. The reference set’s reference names are a superset of those found in the referenceBounds.

For example, given a variant set that is mapped to the GRCh38 reference set and contains a single variant on reference ‘X’, referenceBounds would contain only an entry for ‘X’, while the associated reference set enumerates all possible references: ‘1’, ‘2’, ‘X’, ‘Y’, ‘MT’, etc.

reference_bounds: Vec<ReferenceBound>

A list of all references used by the variants in a variant set with associated coordinate upper bounds for each one.

metadata: Vec<VariantSetMetadata>

The metadata associated with this variant set.

name: String

User-specified, mutable name.

description: String

A textual description of this variant set.

Trait Implementations

impl Clone for VariantSet

fn clone(&self) -> VariantSet

Returns a copy of the value.

pub fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for VariantSet

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Default for VariantSet

fn default() -> VariantSet

Returns the “default value” for a type.

impl Message for VariantSet

fn encode_raw<B>(&self, buf: &mut B) where
    B: BufMut, 

fn merge_field<B>(
    &mut self,
    tag: u32,
    wire_type: WireType,
    buf: &mut B,
    ctx: DecodeContext
) -> Result<(), DecodeError> where
    B: Buf, 

fn encoded_len(&self) -> usize

Returns the encoded length of the message without a length delimiter.

fn clear(&mut self)

Clears the message, resetting all fields to their default.

pub fn encode<B>(&self, buf: &mut B) -> Result<(), EncodeError> where
    B: BufMut, 

Encodes the message to a buffer.

pub fn encode_length_delimited<B>(&self, buf: &mut B) -> Result<(), EncodeError> where
    B: BufMut, 

Encodes the message with a length-delimiter to a buffer.

pub fn decode<B>(buf: B) -> Result<Self, DecodeError> where
    Self: Default,
    B: Buf, 

Decodes an instance of the message from a buffer.

pub fn decode_length_delimited<B>(buf: B) -> Result<Self, DecodeError> where
    Self: Default,
    B: Buf, 

Decodes a length-delimited instance of the message from the buffer.

pub fn merge<B>(&mut self, buf: B) -> Result<(), DecodeError> where
    B: Buf, 

Decodes an instance of the message from a buffer, and merges it into self.

pub fn merge_length_delimited<B>(&mut self, buf: B) -> Result<(), DecodeError> where
    B: Buf, 

Decodes a length-delimited instance of the message from buffer, and merges it into self.

impl PartialEq<VariantSet> for VariantSet

fn eq(&self, other: &VariantSet) -> bool

This method tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &VariantSet) -> bool

This method tests for !=.

impl StructuralPartialEq for VariantSet