Struct gapi_grpc::google::genomics::v1::ReadGroup

pub struct ReadGroup {
    pub id: String,
    pub dataset_id: String,
    pub name: String,
    pub description: String,
    pub sample_id: String,
    pub experiment: Option<Experiment>,
    pub predicted_insert_size: i32,
    pub programs: Vec<Program>,
    pub reference_set_id: String,
    pub info: HashMap<String, ListValue>,
}

A read group is all the data that’s processed the same way by the sequencer.

Fields

id: String

The server-generated read group ID, unique for all read groups. Note: This is different than the @RG ID field in the SAM spec. For that value, see [name][google.genomics.v1.ReadGroup.name].

dataset_id: String

The dataset to which this read group belongs.

name: String

The read group name. This corresponds to the @RG ID field in the SAM spec.

description: String

A free-form text description of this read group.

sample_id: String

A client-supplied sample identifier for the reads in this read group.

experiment: Option<Experiment>

The experiment used to generate this read group.

predicted_insert_size: i32

The predicted insert size of this read group. The insert size is the length the sequenced DNA fragment from end-to-end, not including the adapters.

programs: Vec<Program>

The programs used to generate this read group. Programs are always identical for all read groups within a read group set. For this reason, only the first read group in a returned set will have this field populated.

reference_set_id: String

The reference set the reads in this read group are aligned to.

info: HashMap<String, ListValue>

A map of additional read group information. This must be of the form map<string, string[]> (string key mapping to a list of string values).

Trait Implementations

impl Clone for ReadGroup

fn clone(&self) -> ReadGroup

Returns a copy of the value.

pub fn clone_from(&mut self, source: &Self)

Performs copy-assignment from source.

impl Debug for ReadGroup

fn fmt(&self, f: &mut Formatter<'_>) -> Result

Formats the value using the given formatter.

impl Default for ReadGroup

fn default() -> ReadGroup

Returns the “default value” for a type.

impl Message for ReadGroup

fn encode_raw<B>(&self, buf: &mut B) where
    B: BufMut, 

fn merge_field<B>(
    &mut self,
    tag: u32,
    wire_type: WireType,
    buf: &mut B,
    ctx: DecodeContext
) -> Result<(), DecodeError> where
    B: Buf, 

fn encoded_len(&self) -> usize

Returns the encoded length of the message without a length delimiter.

fn clear(&mut self)

Clears the message, resetting all fields to their default.

pub fn encode<B>(&self, buf: &mut B) -> Result<(), EncodeError> where
    B: BufMut, 

Encodes the message to a buffer.

pub fn encode_length_delimited<B>(&self, buf: &mut B) -> Result<(), EncodeError> where
    B: BufMut, 

Encodes the message with a length-delimiter to a buffer.

pub fn decode<B>(buf: B) -> Result<Self, DecodeError> where
    Self: Default,
    B: Buf, 

Decodes an instance of the message from a buffer.

pub fn decode_length_delimited<B>(buf: B) -> Result<Self, DecodeError> where
    Self: Default,
    B: Buf, 

Decodes a length-delimited instance of the message from the buffer.

pub fn merge<B>(&mut self, buf: B) -> Result<(), DecodeError> where
    B: Buf, 

Decodes an instance of the message from a buffer, and merges it into self.

pub fn merge_length_delimited<B>(&mut self, buf: B) -> Result<(), DecodeError> where
    B: Buf, 

Decodes a length-delimited instance of the message from buffer, and merges it into self.

impl PartialEq<ReadGroup> for ReadGroup

fn eq(&self, other: &ReadGroup) -> bool

This method tests for self and other values to be equal, and is used by ==.

fn ne(&self, other: &ReadGroup) -> bool

This method tests for !=.

impl StructuralPartialEq for ReadGroup